Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RB1P06400 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RB1P06400 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RB1P06400 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RB1P06400 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 AC026316.1-201ENST00000398900 414 ntBASIC16.12■□□□□ 0.17
RB1P06400 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.12■□□□□ 0.17
RB1P06400 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.12■□□□□ 0.17
RB1P06400 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 AC019193.1-201ENST00000506678 823 ntBASIC16.12■□□□□ 0.17
RB1P06400 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.12■□□□□ 0.17
RB1P06400 AL358472.3-201ENST00000608147 415 ntBASIC16.12■□□□□ 0.17
RB1P06400 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RB1P06400 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RB1P06400 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 MTHFR-217ENST00000641820 1569 ntBASIC16.12■□□□□ 0.17
RB1P06400 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.12■□□□□ 0.17
RB1P06400 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RB1P06400 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.11■□□□□ 0.17
RB1P06400 SNORD3B-2-202ENST00000571722 791 ntBASIC16.11■□□□□ 0.17
RB1P06400 MIR4750-201ENST00000584564 56 ntBASIC16.11■□□□□ 0.17
RB1P06400 AC004466.1-201ENST00000599515 1080 ntBASIC16.11■□□□□ 0.17
RB1P06400 AL132994.2-201ENST00000603120 687 ntBASIC16.11■□□□□ 0.17
RB1P06400 AP003419.4-201ENST00000616071 517 ntBASIC16.11■□□□□ 0.17
RB1P06400 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 AC002472.3-201ENST00000640124 621 ntBASIC16.11■□□□□ 0.17
RB1P06400 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.11■□□□□ 0.17
RB1P06400 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
RB1P06400 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
RB1P06400 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.11■□□□□ 0.17
RB1P06400 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.11■□□□□ 0.17
RB1P06400 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RB1P06400 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RB1P06400 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.1■□□□□ 0.17
RB1P06400 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RB1P06400 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms