Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC138969.2-201ENST00000532739 9932 ntBASIC11.78□□□□□ -0.52
TCRAP04437 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
TCRAP04437 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
TCRAP04437 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
TCRAP04437 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.77□□□□□ -0.52
TCRAP04437 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.77□□□□□ -0.52
TCRAP04437 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
TCRAP04437 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TCRAP04437 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TCRAP04437 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 AC079781.3-201ENST00000449110 356 ntBASIC11.77□□□□□ -0.53
TCRAP04437 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.77□□□□□ -0.53
TCRAP04437 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.77□□□□□ -0.53
TCRAP04437 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 AL135744.1-201ENST00000565098 629 ntBASIC11.77□□□□□ -0.53
TCRAP04437 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.77□□□□□ -0.53
TCRAP04437 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.77□□□□□ -0.53
TCRAP04437 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.77□□□□□ -0.53
TCRAP04437 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.77□□□□□ -0.53
TCRAP04437 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRAP04437 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRAP04437 AL928921.2-201ENST00000641325 2442 ntBASIC11.77□□□□□ -0.53
TCRAP04437 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRAP04437 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRAP04437 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRAP04437 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.77□□□□□ -0.53
TCRAP04437 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.76□□□□□ -0.53
TCRAP04437 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.76□□□□□ -0.53
TCRAP04437 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.76□□□□□ -0.53
TCRAP04437 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TCRAP04437 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TCRAP04437 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms