Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 AC112693.3-201ENST00000624819 1983 ntBASIC13.72□□□□□ -0.21
APOC1P02654 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 KRT8P44-201ENST00000441609 1350 ntBASIC13.71□□□□□ -0.21
APOC1P02654 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC1P02654 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOC1P02654 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 ST20-AS1-201ENST00000560255 4223 ntBASIC13.71□□□□□ -0.21
APOC1P02654 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC1P02654 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 AL731571.1-201ENST00000617058 5428 ntBASIC13.71□□□□□ -0.21
APOC1P02654 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 AP006288.1-201ENST00000446065 395 ntBASIC13.71□□□□□ -0.21
APOC1P02654 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOC1P02654 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.71□□□□□ -0.21
APOC1P02654 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC1P02654 AL079307.3-201ENST00000556114 283 ntBASIC13.71□□□□□ -0.21
APOC1P02654 SNHG9-202ENST00000564014 471 ntBASIC13.71□□□□□ -0.21
APOC1P02654 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC1P02654 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC1P02654 AL589739.1-201ENST00000607720 493 ntBASIC13.71□□□□□ -0.21
APOC1P02654 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
APOC1P02654 AC079781.4-201ENST00000641908 219 ntBASIC13.71□□□□□ -0.21
APOC1P02654 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOC1P02654 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC1P02654 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC1P02654 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC1P02654 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.71□□□□□ -0.22
APOC1P02654 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
APOC1P02654 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
APOC1P02654 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
APOC1P02654 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APOC1P02654 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APOC1P02654 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.71□□□□□ -0.22
APOC1P02654 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOC1P02654 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 CNN2P11-201ENST00000429351 262 ntBASIC13.7□□□□□ -0.22
APOC1P02654 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC1P02654 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms