Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VAPBO95292 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
VAPBO95292 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.52■□□□□ 0.08
VAPBO95292 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.52■□□□□ 0.08
VAPBO95292 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VAPBO95292 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VAPBO95292 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VAPBO95292 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.52■□□□□ 0.08
VAPBO95292 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 GHSR-202ENST00000427970 912 ntBASIC15.52■□□□□ 0.08
VAPBO95292 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.52■□□□□ 0.08
VAPBO95292 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.52■□□□□ 0.08
VAPBO95292 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.52■□□□□ 0.08
VAPBO95292 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.52■□□□□ 0.08
VAPBO95292 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 AL390754.1-201ENST00000619088 582 ntBASIC15.52■□□□□ 0.08
VAPBO95292 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.52■□□□□ 0.08
VAPBO95292 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
VAPBO95292 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.52■□□□□ 0.08
VAPBO95292 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 AC013726.1-201ENST00000563747 2285 ntBASIC15.52■□□□□ 0.07
VAPBO95292 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.52■□□□□ 0.07
VAPBO95292 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 LINC01101-201ENST00000622953 1884 ntBASIC15.52■□□□□ 0.07
VAPBO95292 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
VAPBO95292 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 AP000845.1-201ENST00000581677 2131 ntBASIC15.52■□□□□ 0.07
VAPBO95292 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.52■□□□□ 0.07
VAPBO95292 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VAPBO95292 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VAPBO95292 AC026748.1-201ENST00000624349 3251 ntBASIC15.51■□□□□ 0.07
VAPBO95292 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VAPBO95292 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.51■□□□□ 0.07
VAPBO95292 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.51■□□□□ 0.07
VAPBO95292 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.51■□□□□ 0.07
VAPBO95292 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 AC114501.2-201ENST00000439631 535 ntBASIC15.51■□□□□ 0.07
VAPBO95292 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
VAPBO95292 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.51■□□□□ 0.07
VAPBO95292 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.51■□□□□ 0.07
VAPBO95292 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.51■□□□□ 0.07
VAPBO95292 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.51■□□□□ 0.07
VAPBO95292 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.51■□□□□ 0.07
VAPBO95292 AC007292.2-201ENST00000593524 1812 ntBASIC15.51■□□□□ 0.07
VAPBO95292 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
VAPBO95292 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
VAPBO95292 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VAPBO95292 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VAPBO95292 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.5■□□□□ 0.07
VAPBO95292 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.5■□□□□ 0.07
VAPBO95292 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.5■□□□□ 0.07
VAPBO95292 FGD5P1-202ENST00000614866 2498 ntBASIC15.5■□□□□ 0.07
VAPBO95292 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.5■□□□□ 0.07
VAPBO95292 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VAPBO95292 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.5■□□□□ 0.07
VAPBO95292 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VAPBO95292 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VAPBO95292 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.5■□□□□ 0.07
VAPBO95292 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VAPBO95292 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms