Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.82□□□□□ -0.2
CDRT1O95170 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
CDRT1O95170 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.82□□□□□ -0.2
CDRT1O95170 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDRT1O95170 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDRT1O95170 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDRT1O95170 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 AL359881.3-201ENST00000602640 1721 ntBASIC13.81□□□□□ -0.2
CDRT1O95170 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
CDRT1O95170 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 MRPL3P1-201ENST00000400109 1033 ntBASIC13.81□□□□□ -0.2
CDRT1O95170 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 AC093909.1-201ENST00000504731 1122 ntBASIC13.81□□□□□ -0.2
CDRT1O95170 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.81□□□□□ -0.2
CDRT1O95170 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 AC104692.2-201ENST00000603054 253 ntBASIC13.81□□□□□ -0.2
CDRT1O95170 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 AC007064.4-201ENST00000637740 555 ntBASIC13.81□□□□□ -0.2
CDRT1O95170 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDRT1O95170 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.81□□□□□ -0.2
CDRT1O95170 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.81□□□□□ -0.2
CDRT1O95170 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDRT1O95170 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDRT1O95170 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDRT1O95170 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.8□□□□□ -0.2
CDRT1O95170 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.8□□□□□ -0.2
CDRT1O95170 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.8□□□□□ -0.2
CDRT1O95170 AC018529.2-202ENST00000611482 3087 ntBASIC13.8□□□□□ -0.2
CDRT1O95170 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDRT1O95170 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CDRT1O95170 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.8□□□□□ -0.2
CDRT1O95170 CICP11-201ENST00000434745 2827 ntBASIC13.8□□□□□ -0.2
CDRT1O95170 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CDRT1O95170 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.8□□□□□ -0.2
CDRT1O95170 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CDRT1O95170 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.8□□□□□ -0.2
CDRT1O95170 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDRT1O95170 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms