Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.89■□□□□ 0.77
LTN1O94822 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.89■□□□□ 0.77
LTN1O94822 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.89■□□□□ 0.77
LTN1O94822 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.88■□□□□ 0.77
LTN1O94822 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
LTN1O94822 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.88■□□□□ 0.77
LTN1O94822 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.88■□□□□ 0.77
LTN1O94822 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 AC013726.1-201ENST00000563747 2285 ntBASIC19.88■□□□□ 0.77
LTN1O94822 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 LINC01165-201ENST00000445190 1623 ntBASIC19.88■□□□□ 0.77
LTN1O94822 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.88■□□□□ 0.77
LTN1O94822 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LTN1O94822 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.88■□□□□ 0.77
LTN1O94822 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.88■□□□□ 0.77
LTN1O94822 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.88■□□□□ 0.77
LTN1O94822 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.88■□□□□ 0.77
LTN1O94822 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.88■□□□□ 0.77
LTN1O94822 AC007718.1-201ENST00000621078 280 ntBASIC19.88■□□□□ 0.77
LTN1O94822 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LTN1O94822 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 AC126365.1-201ENST00000578585 1514 ntBASIC19.87■□□□□ 0.77
LTN1O94822 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LTN1O94822 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LTN1O94822 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 SALL4P5-201ENST00000419001 1760 ntBASIC19.87■□□□□ 0.77
LTN1O94822 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.87■□□□□ 0.77
LTN1O94822 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.87■□□□□ 0.77
LTN1O94822 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.87■□□□□ 0.77
LTN1O94822 AC007881.3-201ENST00000608897 607 ntBASIC19.87■□□□□ 0.77
LTN1O94822 AC133540.1-201ENST00000620845 1019 ntBASIC19.87■□□□□ 0.77
LTN1O94822 AL353726.2-201ENST00000623259 884 ntBASIC19.87■□□□□ 0.77
LTN1O94822 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LTN1O94822 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LTN1O94822 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.87■□□□□ 0.77
LTN1O94822 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 AC012441.2-201ENST00000444843 739 ntBASIC19.86■□□□□ 0.77
LTN1O94822 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.86■□□□□ 0.77
LTN1O94822 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.86■□□□□ 0.77
LTN1O94822 AL109837.1-201ENST00000603272 613 ntBASIC19.86■□□□□ 0.77
LTN1O94822 RN7SL736P-201ENST00000613111 269 ntBASIC19.86■□□□□ 0.77
LTN1O94822 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
LTN1O94822 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms