Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
USH2AO75445 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 CFL1P6-201ENST00000400899 494 ntBASIC6.67□□□□□ -1.34
USH2AO75445 DUTP3-201ENST00000450025 415 ntBASIC6.67□□□□□ -1.34
USH2AO75445 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 RN7SL69P-201ENST00000468423 272 ntBASIC6.67□□□□□ -1.34
USH2AO75445 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 AC092862.1-201ENST00000541534 533 ntBASIC6.67□□□□□ -1.34
USH2AO75445 AC138701.2-201ENST00000553634 226 ntBASIC6.67□□□□□ -1.34
USH2AO75445 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 NF1P11-201ENST00000621292 1282 ntBASIC6.67□□□□□ -1.34
USH2AO75445 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 AC092299.1-201ENST00000632679 757 ntBASIC6.67□□□□□ -1.34
USH2AO75445 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC6.67□□□□□ -1.34
USH2AO75445 RPSAP15-201ENST00000448168 861 ntBASIC6.67□□□□□ -1.34
USH2AO75445 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 MIR2392-201ENST00000584881 84 ntBASIC6.67□□□□□ -1.34
USH2AO75445 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC6.67□□□□□ -1.34
USH2AO75445 AL450472.2-201ENST00000603663 1156 ntBASIC6.67□□□□□ -1.34
USH2AO75445 AC087392.5-201ENST00000612517 489 ntBASIC6.67□□□□□ -1.34
USH2AO75445 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 API5-208ENST00000531273 1868 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 FAU-201ENST00000279259 461 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
USH2AO75445 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 AC100827.2-201ENST00000563214 1194 ntBASIC6.67□□□□□ -1.34
USH2AO75445 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 AC006986.1-201ENST00000612764 241 ntBASIC6.67□□□□□ -1.34
USH2AO75445 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
USH2AO75445 ALOX12P2-203ENST00000570921 1945 ntBASIC6.67□□□□□ -1.34
USH2AO75445 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
USH2AO75445 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 AC005962.1-201ENST00000584100 773 ntBASIC6.67□□□□□ -1.34
USH2AO75445 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC6.67□□□□□ -1.34
USH2AO75445 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 AP001094.4-201ENST00000579008 2176 ntBASIC6.67□□□□□ -1.34
USH2AO75445 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USH2AO75445 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
USH2AO75445 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC6.67□□□□□ -1.34
USH2AO75445 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
USH2AO75445 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 AC092570.1-201ENST00000414446 469 ntBASIC6.66□□□□□ -1.34
USH2AO75445 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms