Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.07□□□□□ -0.48
CUBNO60494 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.07□□□□□ -0.48
CUBNO60494 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.07□□□□□ -0.48
CUBNO60494 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 RPL18AP3-201ENST00000462885 528 ntBASIC12.07□□□□□ -0.48
CUBNO60494 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.07□□□□□ -0.48
CUBNO60494 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.07□□□□□ -0.48
CUBNO60494 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.07□□□□□ -0.48
CUBNO60494 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 AL132780.4-201ENST00000624870 1135 ntBASIC12.07□□□□□ -0.48
CUBNO60494 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.07□□□□□ -0.48
CUBNO60494 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CUBNO60494 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CUBNO60494 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 RN7SL396P-201ENST00000471086 295 ntBASIC12.06□□□□□ -0.48
CUBNO60494 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
CUBNO60494 AC073911.3-201ENST00000624401 631 ntBASIC12.06□□□□□ -0.48
CUBNO60494 KRT8P21-201ENST00000430398 1491 ntBASIC12.06□□□□□ -0.48
CUBNO60494 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 CICP13-201ENST00000422015 2789 ntBASIC12.06□□□□□ -0.48
CUBNO60494 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.06□□□□□ -0.48
CUBNO60494 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 FAM90A7P-201ENST00000382628 1395 ntBASIC12.06□□□□□ -0.48
CUBNO60494 FAM90A23P-201ENST00000400136 1395 ntBASIC12.06□□□□□ -0.48
CUBNO60494 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.06□□□□□ -0.48
CUBNO60494 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.06□□□□□ -0.48
CUBNO60494 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.06□□□□□ -0.48
CUBNO60494 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.06□□□□□ -0.48
CUBNO60494 AL132994.2-201ENST00000603120 687 ntBASIC12.06□□□□□ -0.48
CUBNO60494 AC025262.2-201ENST00000623975 1056 ntBASIC12.06□□□□□ -0.48
CUBNO60494 NAP1L6-202ENST00000641404 1222 ntBASIC12.06□□□□□ -0.48
CUBNO60494 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CUBNO60494 ACTBP7-201ENST00000418351 1124 ntBASIC12.06□□□□□ -0.48
CUBNO60494 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.06□□□□□ -0.48
CUBNO60494 MIR4522-201ENST00000584932 87 ntBASIC12.06□□□□□ -0.48
CUBNO60494 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CUBNO60494 AC092850.2-201ENST00000623821 2697 ntBASIC12.06□□□□□ -0.48
CUBNO60494 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.06□□□□□ -0.48
CUBNO60494 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CUBNO60494 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CUBNO60494 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CUBNO60494 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CUBNO60494 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CUBNO60494 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.05□□□□□ -0.48
CUBNO60494 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.05□□□□□ -0.48
CUBNO60494 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.05□□□□□ -0.48
CUBNO60494 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.05□□□□□ -0.48
CUBNO60494 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.05□□□□□ -0.48
CUBNO60494 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.05□□□□□ -0.48
CUBNO60494 AC103810.10-201ENST00000606504 343 ntBASIC12.05□□□□□ -0.48
CUBNO60494 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CUBNO60494 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CUBNO60494 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms