Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.03■□□□□ -0
HDAC3O15379 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 AC140113.2-201ENST00000604370 208 ntBASIC15.03■□□□□ -0
HDAC3O15379 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.03■□□□□ -0
HDAC3O15379 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 AP001267.2-201ENST00000532619 2086 ntBASIC15.03■□□□□ -0
HDAC3O15379 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HDAC3O15379 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.03■□□□□ -0
HDAC3O15379 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HDAC3O15379 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HDAC3O15379 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HDAC3O15379 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
HDAC3O15379 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
HDAC3O15379 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HDAC3O15379 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.02■□□□□ -0
HDAC3O15379 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.02■□□□□ -0
HDAC3O15379 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.02■□□□□ -0
HDAC3O15379 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.02■□□□□ -0
HDAC3O15379 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
HDAC3O15379 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.02■□□□□ -0
HDAC3O15379 AL592309.1-201ENST00000443127 649 ntBASIC15.02■□□□□ -0
HDAC3O15379 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.02■□□□□ -0
HDAC3O15379 ACTG1P14-201ENST00000446382 1122 ntBASIC15.02■□□□□ -0
HDAC3O15379 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.02■□□□□ -0
HDAC3O15379 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HDAC3O15379 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.02■□□□□ -0
HDAC3O15379 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.02□□□□□ -0.01
HDAC3O15379 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HDAC3O15379 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HDAC3O15379 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HDAC3O15379 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HDAC3O15379 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HDAC3O15379 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HDAC3O15379 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.02□□□□□ -0.01
HDAC3O15379 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.02□□□□□ -0.01
HDAC3O15379 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HDAC3O15379 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.02□□□□□ -0.01
HDAC3O15379 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HDAC3O15379 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HDAC3O15379 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HDAC3O15379 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.01□□□□□ -0.01
HDAC3O15379 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.01□□□□□ -0.01
HDAC3O15379 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.01□□□□□ -0.01
HDAC3O15379 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.01□□□□□ -0.01
HDAC3O15379 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
HDAC3O15379 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
HDAC3O15379 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HDAC3O15379 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms