Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AL390961.4-201ENST00000623958 2535 ntBASIC16.31■□□□□ 0.2
CEP290O15078 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CEP290O15078 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CEP290O15078 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CEP290O15078 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.31■□□□□ 0.2
CEP290O15078 BCL2L12P1-201ENST00000508390 733 ntBASIC16.31■□□□□ 0.2
CEP290O15078 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 TREHP1-201ENST00000531328 465 ntBASIC16.31■□□□□ 0.2
CEP290O15078 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.31■□□□□ 0.2
CEP290O15078 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.31■□□□□ 0.2
CEP290O15078 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.31■□□□□ 0.2
CEP290O15078 BCL2-203ENST00000589955 5011 ntBASIC16.31■□□□□ 0.2
CEP290O15078 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.31■□□□□ 0.2
CEP290O15078 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CEP290O15078 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CEP290O15078 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.3■□□□□ 0.2
CEP290O15078 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.3■□□□□ 0.2
CEP290O15078 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CEP290O15078 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CEP290O15078 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 AC020910.5-201ENST00000623668 1865 ntBASIC16.3■□□□□ 0.2
CEP290O15078 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.3■□□□□ 0.2
CEP290O15078 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 RPSAP15-201ENST00000448168 861 ntBASIC16.3■□□□□ 0.2
CEP290O15078 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.3■□□□□ 0.2
CEP290O15078 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.3■□□□□ 0.2
CEP290O15078 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.3■□□□□ 0.2
CEP290O15078 LINC02199-201ENST00000506655 2702 ntBASIC16.3■□□□□ 0.2
CEP290O15078 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CEP290O15078 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CEP290O15078 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 NHP2P1-201ENST00000335274 462 ntBASIC16.29■□□□□ 0.2
CEP290O15078 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.29■□□□□ 0.2
CEP290O15078 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CEP290O15078 MIR6746-201ENST00000620971 63 ntBASIC16.29■□□□□ 0.2
CEP290O15078 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CEP290O15078 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.29■□□□□ 0.2
CEP290O15078 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.29■□□□□ 0.2
CEP290O15078 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.29■□□□□ 0.2
CEP290O15078 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.29■□□□□ 0.2
CEP290O15078 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC16.29■□□□□ 0.2
CEP290O15078 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.29■□□□□ 0.2
CEP290O15078 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 AC011477.6-201ENST00000604980 1927 ntBASIC16.29■□□□□ 0.2
CEP290O15078 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.29■□□□□ 0.2
CEP290O15078 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CEP290O15078 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CEP290O15078 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CEP290O15078 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms