Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 AC079328.2-201ENST00000561241 3354 ntBASIC17.54■□□□□ 0.4
ATP2A1O14983 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ATP2A1O14983 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.54■□□□□ 0.4
ATP2A1O14983 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 AC004898.1-201ENST00000451057 766 ntBASIC17.54■□□□□ 0.4
ATP2A1O14983 AC104306.2-201ENST00000451877 341 ntBASIC17.54■□□□□ 0.4
ATP2A1O14983 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.54■□□□□ 0.4
ATP2A1O14983 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 DUX4L47-201ENST00000566374 394 ntBASIC17.54■□□□□ 0.4
ATP2A1O14983 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP2A1O14983 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A1O14983 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A1O14983 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A1O14983 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP2A1O14983 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATP2A1O14983 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A1O14983 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP2A1O14983 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATP2A1O14983 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP2A1O14983 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP2A1O14983 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP2A1O14983 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP2A1O14983 AP001258.2-201ENST00000529891 490 ntBASIC17.53■□□□□ 0.4
ATP2A1O14983 AP006547.1-201ENST00000563435 692 ntBASIC17.53■□□□□ 0.4
ATP2A1O14983 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP2A1O14983 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A1O14983 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP2A1O14983 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A1O14983 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP2A1O14983 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A1O14983 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A1O14983 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATP2A1O14983 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP2A1O14983 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATP2A1O14983 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.52■□□□□ 0.4
ATP2A1O14983 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP2A1O14983 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 MIR663B-201ENST00000408361 115 ntBASIC17.52■□□□□ 0.4
ATP2A1O14983 BCYRN1-201ENST00000418539 200 ntBASIC17.52■□□□□ 0.4
ATP2A1O14983 HLA-K-203ENST00000430151 1046 ntBASIC17.52■□□□□ 0.4
ATP2A1O14983 FAM8A4P-201ENST00000435433 1213 ntBASIC17.52■□□□□ 0.4
ATP2A1O14983 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A1O14983 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A1O14983 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
ATP2A1O14983 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.52■□□□□ 0.4
ATP2A1O14983 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms