Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL391069.4-201ENST00000609583 481 ntBASIC15.56■□□□□ 0.08
TRIM38O00635 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.56■□□□□ 0.08
TRIM38O00635 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM38O00635 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 AC007292.2-201ENST00000593524 1812 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 AC004987.2-201ENST00000395959 1148 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM38O00635 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 KRT223P-202ENST00000449164 1292 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM38O00635 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM38O00635 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM38O00635 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM38O00635 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM38O00635 AP005482.1-201ENST00000563722 1273 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 BTNL10-201ENST00000595971 695 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRIM38O00635 AC133552.6-201ENST00000613406 534 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 AL033527.4-201ENST00000641026 673 ntBASIC15.55■□□□□ 0.08
TRIM38O00635 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM38O00635 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM38O00635 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM38O00635 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM38O00635 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM38O00635 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM38O00635 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM38O00635 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM38O00635 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM38O00635 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM38O00635 CICP13-201ENST00000422015 2789 ntBASIC15.54■□□□□ 0.08
TRIM38O00635 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM38O00635 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 TCAF2P1-201ENST00000291129 2421 ntBASIC15.54■□□□□ 0.08
TRIM38O00635 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRIM38O00635 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM38O00635 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 ANKRD19P-201ENST00000338192 862 ntBASIC15.54■□□□□ 0.08
TRIM38O00635 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM38O00635 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM38O00635 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
TRIM38O00635 RPL13P2-201ENST00000440687 659 ntBASIC15.54■□□□□ 0.08
TRIM38O00635 AC092658.1-201ENST00000505836 891 ntBASIC15.54■□□□□ 0.08
TRIM38O00635 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms