Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.3■□□□□ 0.36
DDX39AO00148 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.3■□□□□ 0.36
DDX39AO00148 AP005019.2-201ENST00000615104 511 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DDX39AO00148 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 AC148477.4-201ENST00000613430 1793 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DDX39AO00148 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.29■□□□□ 0.36
DDX39AO00148 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 AC093525.8-201ENST00000624099 1342 ntBASIC17.29■□□□□ 0.36
DDX39AO00148 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 ACKR1-201ENST00000368121 1240 ntBASIC17.29■□□□□ 0.36
DDX39AO00148 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 KLF2P2-201ENST00000416807 1039 ntBASIC17.29■□□□□ 0.36
DDX39AO00148 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX39AO00148 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX39AO00148 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX39AO00148 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX39AO00148 SAMD11P1-201ENST00000571429 661 ntBASIC17.29■□□□□ 0.36
DDX39AO00148 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 GNRHR2-203ENST00000581100 1187 ntBASIC17.29■□□□□ 0.36
DDX39AO00148 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX39AO00148 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX39AO00148 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
DDX39AO00148 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DDX39AO00148 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DDX39AO00148 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
DDX39AO00148 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX39AO00148 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
DDX39AO00148 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DDX39AO00148 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
DDX39AO00148 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.28■□□□□ 0.36
DDX39AO00148 RPL5P21-201ENST00000404620 815 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX39AO00148 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
DDX39AO00148 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 KRT223P-202ENST00000449164 1292 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 KLF2P4-201ENST00000451959 1225 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.28■□□□□ 0.36
DDX39AO00148 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX39AO00148 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.28■□□□□ 0.36
DDX39AO00148 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.28■□□□□ 0.36
DDX39AO00148 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX39AO00148 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX39AO00148 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 AC133552.6-201ENST00000613406 534 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 AC145423.3-201ENST00000615987 467 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.28■□□□□ 0.36
DDX39AO00148 C18orf15-201ENST00000623680 2534 ntBASIC17.28■□□□□ 0.36
DDX39AO00148 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.28■□□□□ 0.36
DDX39AO00148 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
DDX39AO00148 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DDX39AO00148 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms