Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CICP4-201ENST00000447359 2812 ntBASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 AC097359.2-201ENST00000604992 2389 ntBASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM49D1C9J1S8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 FAM58DP-201ENST00000428076 619 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 MKNK2P1-201ENST00000437526 628 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ALG1L5P-201ENST00000482043 771 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 AC015910.1-201ENST00000579400 975 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 AC022145.2-201ENST00000598203 171 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 KRT8P12-202ENST00000472924 1397 ntBASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM49D1C9J1S8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 KRT18P32-201ENST00000424695 1287 ntBASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM49D1C9J1S8 RN7SL828P-201ENST00000607615 303 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms