Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 KRT18P32-201ENST00000424695 1287 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 GHSR-202ENST00000427970 912 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 ALG1L5P-201ENST00000482043 771 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC011467.4-201ENST00000594891 528 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 TCAF1P1-201ENST00000414990 2232 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 KRT8P12-202ENST00000472924 1397 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC152010.1-201ENST00000415779 2006 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 TARDBPP1-201ENST00000442013 1203 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 CEND1P1-201ENST00000451006 455 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL121894.2-201ENST00000602977 491 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL133215.2-201ENST00000609242 977 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL035456.1-201ENST00000456064 1369 ntBASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
TRBV6-7A0A0A0MS04 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms