Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 AC133539.2-201ENST00000604757 467 ntBASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 AC093813.1-201ENST00000605066 256 ntBASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 GPR182-203ENST00000622922 591 ntBASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 LINC00554-201ENST00000564841 3011 ntBASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI2Q9Y5P3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 TSPY26P-202ENST00000565928 3884 ntBASIC15.58■□□□□ 0.09
RAI2Q9Y5P3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 AC092933.1-201ENST00000393644 945 ntBASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 BCYRN1-201ENST00000418539 200 ntBASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI2Q9Y5P3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AL138799.1-201ENST00000448213 1675 ntBASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 SOCS2P1-201ENST00000417727 557 ntBASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 RN7SL837P-201ENST00000463010 287 ntBASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms