Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 LINC02228-204ENST00000642115 2962 ntBASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 INTS4P2-202ENST00000614726 2019 ntBASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 BAATP1-201ENST00000412284 1225 ntBASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 AC016694.1-201ENST00000434179 700 ntBASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 DUX4L45-201ENST00000566406 1057 ntBASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.85■□□□□ 0.77
PDZRN3Q9UPQ7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 AC127383.1-201ENST00000444697 1800 ntBASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 MIR1247-201ENST00000408206 136 ntBASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 GPAA1P2-201ENST00000417923 928 ntBASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 AC010328.2-201ENST00000597698 1111 ntBASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 KRT8P37-201ENST00000451609 1420 ntBASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PDZRN3Q9UPQ7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms