Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 WIZP1-201ENST00000531444 2299 ntBASIC6.05□□□□□ -1.44
MACF1Q9UPN3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ATP5G1P7-201ENST00000444398 400 ntBASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 BCAR1P1-201ENST00000553953 636 ntBASIC6.05□□□□□ -1.44
MACF1Q9UPN3 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 CLPP-204ENST00000596149 745 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 AL121992.3-201ENST00000606186 346 ntBASIC6.05□□□□□ -1.44
MACF1Q9UPN3 AC139100.2-201ENST00000616901 662 ntBASIC6.05□□□□□ -1.44
MACF1Q9UPN3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MACF1Q9UPN3 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC089987.2-201ENST00000328207 936 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 RN7SKP212-201ENST00000410851 328 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC009145.4-201ENST00000625119 1294 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms