Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RN7SL530P-201ENST00000485097 298 ntBASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 RN7SL300P-201ENST00000582522 318 ntBASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RIMBP3Q9UFD9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AP000354.1-201ENST00000396982 456 ntBASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 SNRPCP15-201ENST00000424055 192 ntBASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AC091304.3-201ENST00000566500 716 ntBASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AC005746.3-201ENST00000614751 393 ntBASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RIMBP3Q9UFD9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RIMBP3Q9UFD9 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 RN7SL363P-201ENST00000482412 273 ntBASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 MYL6-215ENST00000549566 685 ntTSL 2 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RIMBP3Q9UFD9 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 HNRNPA1P2-207ENST00000432375 960 ntBASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 CD164-210ENST00000512821 964 ntTSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 BMF-206ENST00000558774 671 ntTSL 3 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC004801.1-201ENST00000549557 360 ntBASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC003686.1-201ENST00000550956 1034 ntBASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 NT5C-204ENST00000578337 582 ntTSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 TYMSP2-201ENST00000589501 424 ntBASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC23.44■■□□□ 1.34
RIMBP3Q9UFD9 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 AC087289.5-201ENST00000586076 3175 ntBASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms