Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 CICP11-201ENST00000434745 2827 ntBASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 AC123567.1-201ENST00000548294 1261 ntBASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 AC099568.2-201ENST00000609194 695 ntBASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 AC007431.3-201ENST00000623221 587 ntBASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CUEDC1Q9NWM3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CUEDC1Q9NWM3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CUEDC1Q9NWM3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 MIR1909-201ENST00000411312 80 ntBASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 ACA64.2-201ENST00000459014 129 ntBASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 WASH4P-201ENST00000564273 1246 ntBASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 RRP7BP-205ENST00000566851 833 ntBASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CUEDC1Q9NWM3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms