Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 CLUHP2-201ENST00000426660 1303 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 MIR663B-201ENST00000408361 115 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC026434.2-201ENST00000506094 1078 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC106820.3-201ENST00000561653 397 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 DUX4L47-201ENST00000566374 394 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 RN7SL713P-201ENST00000582127 302 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FBXO28Q9NVF7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 AL360270.3-201ENST00000609118 1348 ntBASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.57■□□□□ 0.4
FBXO28Q9NVF7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 AC138466.3-201ENST00000619983 221 ntBASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FBXO28Q9NVF7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms