Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 BX539320.1-201ENST00000623759 877 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 CU634019.7-201ENST00000624153 1185 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 FP236241.2-201ENST00000624906 1185 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CISHQ9NSE2 AC068587.6-202ENST00000641839 5619 ntBASIC16.39■□□□□ 0.22
CISHQ9NSE2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CISHQ9NSE2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 AL035633.1-201ENST00000406139 838 ntBASIC16.39■□□□□ 0.21
CISHQ9NSE2 AP006294.1-201ENST00000415407 339 ntBASIC16.39■□□□□ 0.21
CISHQ9NSE2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 AL162726.2-201ENST00000438986 1017 ntBASIC16.39■□□□□ 0.21
CISHQ9NSE2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 AC005252.2-201ENST00000624630 1141 ntBASIC16.39■□□□□ 0.21
CISHQ9NSE2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 ZBED1P1-201ENST00000502364 1930 ntBASIC16.39■□□□□ 0.21
CISHQ9NSE2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CISHQ9NSE2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.39■□□□□ 0.21
CISHQ9NSE2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 AC006058.4-201ENST00000624016 1670 ntBASIC16.38■□□□□ 0.21
CISHQ9NSE2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 AC098614.1-201ENST00000368528 745 ntBASIC16.38■□□□□ 0.21
CISHQ9NSE2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CISHQ9NSE2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 RN7SL692P-201ENST00000464677 288 ntBASIC16.38■□□□□ 0.21
CISHQ9NSE2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.38■□□□□ 0.21
CISHQ9NSE2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms