Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 FAM197Y7-201ENST00000432892 766 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AC099548.2-209ENST00000480264 625 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 RN7SL560P-201ENST00000577943 264 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AC244093.1-201ENST00000610837 814 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AL138799.1-201ENST00000448213 1675 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AL365203.3-201ENST00000609742 2057 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 AC024909.3-201ENST00000611513 2257 ntBASIC15.97■□□□□ 0.15
HPS4Q9NQG7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS4Q9NQG7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 AC078819.1-201ENST00000547454 765 ntBASIC15.96■□□□□ 0.15
HPS4Q9NQG7 AC012085.1-201ENST00000548270 765 ntBASIC15.96■□□□□ 0.15
HPS4Q9NQG7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 AC145423.3-201ENST00000615987 467 ntBASIC15.96■□□□□ 0.15
HPS4Q9NQG7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.96■□□□□ 0.15
HPS4Q9NQG7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HPS4Q9NQG7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
HPS4Q9NQG7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HPS4Q9NQG7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HPS4Q9NQG7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HPS4Q9NQG7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.96■□□□□ 0.14
HPS4Q9NQG7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AL138709.1-201ENST00000614840 1693 ntBASIC15.95■□□□□ 0.14
HPS4Q9NQG7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AC006001.1-201ENST00000325130 474 ntBASIC15.95■□□□□ 0.14
HPS4Q9NQG7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 PFN1P12-201ENST00000455938 534 ntBASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 ZNF767P-206ENST00000513792 565 ntBASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS4Q9NQG7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms