Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 AP002414.3-201ENST00000589352 1468 ntBASIC14.12□□□□□ -0.15
HMG20AQ9NP66 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 AC097359.2-201ENST00000604992 2389 ntBASIC14.11□□□□□ -0.15
HMG20AQ9NP66 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 MRPL20P1-201ENST00000400819 433 ntBASIC14.11□□□□□ -0.15
HMG20AQ9NP66 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 AC012640.2-201ENST00000561606 901 ntBASIC14.11□□□□□ -0.15
HMG20AQ9NP66 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HMG20AQ9NP66 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.1□□□□□ -0.15
HMG20AQ9NP66 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 AL691432.3-201ENST00000621860 400 ntBASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PEG13-201ENST00000631594 5667 ntBASIC14.1□□□□□ -0.15
HMG20AQ9NP66 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.1□□□□□ -0.15
HMG20AQ9NP66 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AC113367.3-201ENST00000508316 1912 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms