Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 MIR661-201ENST00000384842 89 ntBASIC13.54□□□□□ -0.24
CDH20Q9HBT6 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PIN1P1-201ENST00000412108 996 ntBASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RRP7BP-205ENST00000566851 833 ntBASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AL391825.1-201ENST00000457671 1364 ntBASIC13.54□□□□□ -0.24
CDH20Q9HBT6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 RPL5P21-201ENST00000404620 815 ntBASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AL353779.1-201ENST00000434793 351 ntBASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 SLC7A15P-201ENST00000424028 1363 ntBASIC13.53□□□□□ -0.24
CDH20Q9HBT6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH20Q9HBT6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDH20Q9HBT6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms