Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AL390755.1-201ENST00000623716 2027 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 MIR600HG-201ENST00000449175 5984 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 RARRES2P5-201ENST00000564013 466 ntBASIC14.74□□□□□ -0.05
BRF2Q9HAW0 AC036164.1-201ENST00000570544 333 ntBASIC14.74□□□□□ -0.05
BRF2Q9HAW0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 AC093512.1-201ENST00000617969 520 ntBASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRF2Q9HAW0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 LINC02228-204ENST00000642115 2962 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AP002414.2-201ENST00000591780 3365 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AL512638.1-201ENST00000457493 794 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 SPDYE18-201ENST00000510091 1050 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AC006538.3-201ENST00000612495 578 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 CLK3P2-201ENST00000427566 1453 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms