Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 BNIP3P13-201ENST00000599968 566 ntBASIC16.72■□□□□ 0.27
HIPK3Q9H422 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 AL603764.1-201ENST00000636452 321 ntBASIC16.72■□□□□ 0.27
HIPK3Q9H422 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 AC006480.2-201ENST00000609770 1337 ntBASIC16.71■□□□□ 0.27
HIPK3Q9H422 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 RN7SL163P-201ENST00000583100 276 ntBASIC16.71■□□□□ 0.27
HIPK3Q9H422 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 AL805961.1-203ENST00000641078 1258 ntBASIC16.71■□□□□ 0.27
HIPK3Q9H422 AC004923.1-202ENST00000642106 209 ntBASIC16.71■□□□□ 0.27
HIPK3Q9H422 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIPK3Q9H422 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
HIPK3Q9H422 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HIPK3Q9H422 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.71■□□□□ 0.26
HIPK3Q9H422 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HIPK3Q9H422 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
HIPK3Q9H422 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.7■□□□□ 0.26
HIPK3Q9H422 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SAMD11P1-201ENST00000571429 661 ntBASIC16.7■□□□□ 0.26
HIPK3Q9H422 AC138466.3-201ENST00000619983 221 ntBASIC16.7■□□□□ 0.26
HIPK3Q9H422 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HIPK3Q9H422 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIPK3Q9H422 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms