Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIK2Q9H0K1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AC138035.3-201ENST00000622706 2791 ntBASIC16.01■□□□□ 0.15
SIK2Q9H0K1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 C1QBPP1-201ENST00000400117 770 ntBASIC16.01■□□□□ 0.15
SIK2Q9H0K1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AC026410.3-201ENST00000514280 936 ntBASIC16.01■□□□□ 0.15
SIK2Q9H0K1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AL033527.5-201ENST00000641382 801 ntBASIC16.01■□□□□ 0.15
SIK2Q9H0K1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIK2Q9H0K1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16■□□□□ 0.15
SIK2Q9H0K1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16■□□□□ 0.15
SIK2Q9H0K1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16■□□□□ 0.15
SIK2Q9H0K1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SIK2Q9H0K1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16■□□□□ 0.15
SIK2Q9H0K1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 AC092384.3-202ENST00000564646 2873 ntBASIC16■□□□□ 0.15
SIK2Q9H0K1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 AC098614.1-201ENST00000368528 745 ntBASIC16■□□□□ 0.15
SIK2Q9H0K1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16■□□□□ 0.15
SIK2Q9H0K1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16■□□□□ 0.15
SIK2Q9H0K1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16■□□□□ 0.15
SIK2Q9H0K1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16■□□□□ 0.15
SIK2Q9H0K1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16■□□□□ 0.15
SIK2Q9H0K1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SIK2Q9H0K1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16■□□□□ 0.15
SIK2Q9H0K1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16■□□□□ 0.15
SIK2Q9H0K1 AL358472.5-202ENST00000641448 1267 ntBASIC16■□□□□ 0.15
SIK2Q9H0K1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16■□□□□ 0.15
SIK2Q9H0K1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 KRT8P22-201ENST00000562317 1415 ntBASIC16■□□□□ 0.15
SIK2Q9H0K1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 MST1L-201ENST00000442552 2185 ntBASIC16■□□□□ 0.15
SIK2Q9H0K1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIK2Q9H0K1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms