Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 AC023824.1-201ENST00000562945 2975 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 TREML5P-201ENST00000421694 576 ntBASIC14.24□□□□□ -0.13
TRIM2Q9C040 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 RPL13P2-201ENST00000440687 659 ntBASIC14.24□□□□□ -0.13
TRIM2Q9C040 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 LINC01101-201ENST00000622953 1884 ntBASIC14.24□□□□□ -0.13
TRIM2Q9C040 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM2Q9C040 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM2Q9C040 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 ZBED1P1-201ENST00000502364 1930 ntBASIC14.23□□□□□ -0.13
TRIM2Q9C040 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 TOMM22P5-201ENST00000416399 439 ntBASIC14.23□□□□□ -0.13
TRIM2Q9C040 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 GHSR-202ENST00000427970 912 ntBASIC14.23□□□□□ -0.13
TRIM2Q9C040 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 AL512361.1-201ENST00000554200 418 ntBASIC14.23□□□□□ -0.13
TRIM2Q9C040 AC010336.2-201ENST00000564226 506 ntBASIC14.23□□□□□ -0.13
TRIM2Q9C040 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.23□□□□□ -0.13
TRIM2Q9C040 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms