Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 KRT8P23-201ENST00000560090 1207 ntBASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 AC145285.3-201ENST00000564603 959 ntBASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 AP001005.1-201ENST00000571755 1248 ntBASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GABARAPL3Q9BY60 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABARAPL3Q9BY60 LILRP1-201ENST00000444199 1370 ntBASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 AL133267.1-201ENST00000398220 340 ntBASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 SPDYE17-201ENST00000412399 783 ntBASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 SLED1-202ENST00000512051 380 ntBASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 AC084121.4-201ENST00000641598 221 ntBASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 AF228730.8-201ENST00000642140 221 ntBASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GABARAPL3Q9BY60 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABARAPL3Q9BY60 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABARAPL3Q9BY60 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
GABARAPL3Q9BY60 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.01□□□□□ -0.17
GABARAPL3Q9BY60 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.01□□□□□ -0.17
GABARAPL3Q9BY60 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABARAPL3Q9BY60 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms