Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC211486.1-202ENST00000416371 468 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 RPS8P6-201ENST00000426177 609 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 HCG4B-203ENST00000450128 991 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC087163.2-201ENST00000457299 853 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC112482.1-201ENST00000492080 688 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC211476.1-201ENST00000503899 468 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC005829.1-201ENST00000570002 483 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC007064.4-201ENST00000637740 555 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 GGT3P-204ENST00000453783 1664 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 LINC01144-201ENST00000626198 1710 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC105206.1-202ENST00000314927 2368 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 DMBT1P1-203ENST00000636837 4628 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC131009.4-201ENST00000624048 1740 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 MCCD1P2-201ENST00000423228 335 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC092183.1-201ENST00000469884 875 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC087641.1-201ENST00000557561 1021 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC020765.3-201ENST00000613051 740 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC087481.3-201ENST00000602886 1894 ntBASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms