Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 KRT8P12-202ENST00000472924 1397 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK1Q99986 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
VRK1Q99986 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
VRK1Q99986 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.72□□□□□ -0.21
VRK1Q99986 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK1Q99986 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
VRK1Q99986 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.72□□□□□ -0.21
VRK1Q99986 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.72□□□□□ -0.21
VRK1Q99986 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK1Q99986 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.72□□□□□ -0.21
VRK1Q99986 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.72□□□□□ -0.21
VRK1Q99986 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK1Q99986 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.72□□□□□ -0.21
VRK1Q99986 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 AL035252.4-201ENST00000624174 288 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.72□□□□□ -0.21
VRK1Q99986 AL033527.5-202ENST00000641632 1098 ntBASIC13.72□□□□□ -0.21
VRK1Q99986 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VRK1Q99986 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.72□□□□□ -0.21
VRK1Q99986 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VRK1Q99986 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK1Q99986 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VRK1Q99986 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.71□□□□□ -0.21
VRK1Q99986 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
VRK1Q99986 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
VRK1Q99986 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
VRK1Q99986 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.71□□□□□ -0.21
VRK1Q99986 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.71□□□□□ -0.21
VRK1Q99986 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.71□□□□□ -0.21
VRK1Q99986 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 AL512361.1-201ENST00000554200 418 ntBASIC13.71□□□□□ -0.21
VRK1Q99986 AC044860.1-202ENST00000559481 777 ntBASIC13.71□□□□□ -0.21
VRK1Q99986 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
VRK1Q99986 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 AL662799.1-202ENST00000614205 422 ntBASIC13.71□□□□□ -0.21
VRK1Q99986 AL358472.5-202ENST00000641448 1267 ntBASIC13.71□□□□□ -0.21
VRK1Q99986 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK1Q99986 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK1Q99986 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.71□□□□□ -0.22
VRK1Q99986 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.71□□□□□ -0.22
VRK1Q99986 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
VRK1Q99986 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.71□□□□□ -0.22
VRK1Q99986 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK1Q99986 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
VRK1Q99986 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 635.7 ms