Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF2Q99805 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF2Q99805 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 MIR661-201ENST00000384842 89 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 PIN1P1-201ENST00000412108 996 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 AL844908.2-201ENST00000609461 460 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 MIR6069-201ENST00000620069 79 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 AC090616.6-203ENST00000579186 1945 ntBASIC14.4□□□□□ -0.1
TM9SF2Q99805 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF2Q99805 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF2Q99805 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF2Q99805 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.39□□□□□ -0.11
TM9SF2Q99805 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms