Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 RCN1P2-201ENST00000398357 915 ntBASIC14.58□□□□□ -0.08
NR1H4Q96RI1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 HCG4-201ENST00000418983 998 ntBASIC14.58□□□□□ -0.08
NR1H4Q96RI1 AP002383.4-201ENST00000442518 975 ntBASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 AP000867.3-201ENST00000524675 377 ntBASIC14.58□□□□□ -0.08
NR1H4Q96RI1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 TPSP2-201ENST00000561760 610 ntBASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CICP11-201ENST00000434745 2827 ntBASIC14.58□□□□□ -0.08
NR1H4Q96RI1 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H4Q96RI1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 DRAXINP1-201ENST00000437611 948 ntBASIC14.57□□□□□ -0.08
NR1H4Q96RI1 AC087163.2-201ENST00000457299 853 ntBASIC14.57□□□□□ -0.08
NR1H4Q96RI1 TPT1P11-201ENST00000458482 498 ntBASIC14.57□□□□□ -0.08
NR1H4Q96RI1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms