Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC112693.3-201ENST00000624819 1983 ntBASIC14.14□□□□□ -0.15
SNX18Q96RF0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 AC023141.5-201ENST00000458585 616 ntBASIC14.14□□□□□ -0.15
SNX18Q96RF0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 AC126365.1-201ENST00000578585 1514 ntBASIC14.14□□□□□ -0.15
SNX18Q96RF0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 AC092127.1-201ENST00000567093 3455 ntBASIC14.14□□□□□ -0.15
SNX18Q96RF0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX18Q96RF0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 MBLAC2-202ENST00000514906 1936 ntBASIC14.13□□□□□ -0.15
SNX18Q96RF0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 KRT8P44-201ENST00000441609 1350 ntBASIC14.13□□□□□ -0.15
SNX18Q96RF0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 CICP8-201ENST00000455800 2813 ntBASIC14.13□□□□□ -0.15
SNX18Q96RF0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 AL353705.2-201ENST00000428243 662 ntBASIC14.13□□□□□ -0.15
SNX18Q96RF0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 AC005237.2-201ENST00000434368 219 ntBASIC14.13□□□□□ -0.15
SNX18Q96RF0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 LINC02084-201ENST00000606069 1096 ntBASIC14.13□□□□□ -0.15
SNX18Q96RF0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms