Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AC016694.1-201ENST00000434179 700 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 RNA5SP412-201ENST00000516234 123 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 FAM8A2P-201ENST00000528813 1142 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 GNRHR2-203ENST00000581100 1187 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AC107373.2-201ENST00000607735 490 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 GPR182-203ENST00000622922 591 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 TUBB1P2-201ENST00000422712 1306 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 TUBB1P1-201ENST00000503144 1300 ntBASIC12.57□□□□□ -0.4
ZNF48Q96MX3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 FAM21FP-201ENST00000426241 1131 ntBASIC12.56□□□□□ -0.4
ZNF48Q96MX3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 KRT90P-201ENST00000549264 1064 ntBASIC12.56□□□□□ -0.4
ZNF48Q96MX3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AC015910.1-201ENST00000579400 975 ntBASIC12.56□□□□□ -0.4
ZNF48Q96MX3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 MIR6869-201ENST00000619434 62 ntBASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms