Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 RNA5SP417-201ENST00000516459 108 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 RN7SL470P-201ENST00000583069 259 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 HLA-DMA-203ENST00000395305 777 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 FTLP5-201ENST00000586853 534 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A21P-201ENST00000510875 1396 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A15P-201ENST00000514465 1395 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A6P-201ENST00000515148 1394 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A16P-201ENST00000526662 1395 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A9P-201ENST00000527940 1395 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A5P-201ENST00000528738 1395 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A14P-201ENST00000530386 1395 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FAM90A13P-201ENST00000534703 1395 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 AC144522.1-201ENST00000625111 1658 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 REXO1L4P-201ENST00000605109 1937 ntBASIC16.3■□□□□ 0.2
ALPK3Q96L96 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.3■□□□□ 0.2
ALPK3Q96L96 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALPK3Q96L96 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 AC114947.1-202ENST00000514136 344 ntBASIC16.29■□□□□ 0.2
ALPK3Q96L96 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 ENPP7P8-202ENST00000527856 1345 ntBASIC16.29■□□□□ 0.2
ALPK3Q96L96 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 AC026434.2-201ENST00000506094 1078 ntBASIC16.29■□□□□ 0.2
ALPK3Q96L96 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 AGGF1P2-201ENST00000426656 2106 ntBASIC16.29■□□□□ 0.2
ALPK3Q96L96 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALPK3Q96L96 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ALPK3Q96L96 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.28■□□□□ 0.2
ALPK3Q96L96 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms