Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 REXO1L5P-201ENST00000622260 2098 ntBASIC13.18□□□□□ -0.3
USP9XQ93008 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 AC008723.1-201ENST00000506922 207 ntBASIC13.18□□□□□ -0.3
USP9XQ93008 AP003398.1-201ENST00000531124 318 ntBASIC13.18□□□□□ -0.3
USP9XQ93008 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
USP9XQ93008 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
USP9XQ93008 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.17□□□□□ -0.3
USP9XQ93008 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 AL139384.1-201ENST00000612143 3047 ntBASIC13.17□□□□□ -0.3
USP9XQ93008 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 AL583805.1-201ENST00000391389 531 ntBASIC13.17□□□□□ -0.3
USP9XQ93008 HLA-K-203ENST00000430151 1046 ntBASIC13.17□□□□□ -0.3
USP9XQ93008 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.17□□□□□ -0.3
USP9XQ93008 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
USP9XQ93008 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.17□□□□□ -0.3
USP9XQ93008 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.17□□□□□ -0.3
USP9XQ93008 AC002472.3-201ENST00000640124 621 ntBASIC13.17□□□□□ -0.3
USP9XQ93008 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
USP9XQ93008 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.17□□□□□ -0.3
USP9XQ93008 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
USP9XQ93008 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.17□□□□□ -0.3
USP9XQ93008 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
USP9XQ93008 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.17□□□□□ -0.3
USP9XQ93008 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.17□□□□□ -0.3
USP9XQ93008 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.17□□□□□ -0.3
USP9XQ93008 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.17□□□□□ -0.3
USP9XQ93008 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.17□□□□□ -0.3
USP9XQ93008 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP9XQ93008 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.16□□□□□ -0.3
USP9XQ93008 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.16□□□□□ -0.3
USP9XQ93008 AL135901.1-201ENST00000451812 333 ntBASIC13.16□□□□□ -0.3
USP9XQ93008 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 PEBP1P2-201ENST00000603980 558 ntBASIC13.16□□□□□ -0.3
USP9XQ93008 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP9XQ93008 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.16□□□□□ -0.3
USP9XQ93008 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
USP9XQ93008 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms