Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AC004987.2-201ENST00000395959 1148 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MIR1233-2-201ENST00000408138 82 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MIR1233-1-201ENST00000408722 82 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 CNN2P11-201ENST00000429351 262 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 RBPMS2P1-201ENST00000437762 623 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 SNHG9-202ENST00000564014 471 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AC026979.3-201ENST00000607315 403 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 CICP4-201ENST00000447359 2812 ntBASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTN4IP1Q8WWV3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 AL353705.2-201ENST00000428243 662 ntBASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 AL139010.1-201ENST00000454878 894 ntBASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 AL450472.2-201ENST00000603663 1156 ntBASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 AC023511.2-201ENST00000618803 211 ntBASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 AC126335.2-201ENST00000623362 4637 ntBASIC13.05□□□□□ -0.32
RTN4IP1Q8WWV3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 INTS4P1-203ENST00000641008 3683 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms