Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 TCAF2P1-201ENST00000291129 2421 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AL360270.3-201ENST00000609118 1348 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AL157414.3-201ENST00000624276 1954 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AL645937.2-201ENST00000396808 931 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 HLA-K-203ENST00000430151 1046 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AC005225.4-201ENST00000557330 545 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AP001063.1-201ENST00000568332 529 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 AC010319.3-201ENST00000597028 470 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 DBET-201ENST00000630918 3363 ntBASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC4A11Q8NBS3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CU639417.3-201ENST00000624240 1404 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 MSTO2P-201ENST00000314835 1709 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 RNU1-114P-201ENST00000365297 166 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AC093433.1-201ENST00000458048 571 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AC132938.2-201ENST00000579188 680 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 IGHV3-72-202ENST00000621503 303 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AL591163.1-201ENST00000641757 987 ntBASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC4A11Q8NBS3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms