Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 GPR182-203ENST00000622922 591 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AL136379.1-201ENST00000623471 2642 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 MSTO2P-201ENST00000314835 1709 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AC104640.1-201ENST00000562617 2109 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 MIR648-201ENST00000385046 94 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 FTH1P14-201ENST00000482930 551 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AP000812.2-201ENST00000538934 718 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AP001063.1-201ENST00000568332 529 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 MIR6869-201ENST00000619434 62 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 AL161772.1-201ENST00000610494 4412 ntBASIC16.78■□□□□ 0.28
VPS52Q8N1B4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VPS52Q8N1B4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AL607033.1-201ENST00000623900 1599 ntBASIC16.77■□□□□ 0.28
VPS52Q8N1B4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AC012441.1-201ENST00000446669 685 ntBASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AC093433.1-201ENST00000458048 571 ntBASIC16.77■□□□□ 0.28
VPS52Q8N1B4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 AC005252.2-201ENST00000624630 1141 ntBASIC16.77■□□□□ 0.28
VPS52Q8N1B4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS52Q8N1B4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.77■□□□□ 0.27
VPS52Q8N1B4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms