Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 XBP1P1-201ENST00000436573 652 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 PHBP15-201ENST00000574228 665 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC103691.2-201ENST00000618824 433 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC092299.1-201ENST00000632679 757 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC012441.2-201ENST00000444843 739 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 RN7SL258P-201ENST00000478664 300 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AL022334.2-201ENST00000610000 484 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC133540.1-201ENST00000620845 1019 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC025262.2-201ENST00000623975 1056 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AL391005.1-201ENST00000623953 2435 ntBASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL27A1Q8IZC6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 PUDPP3-201ENST00000445368 636 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 RBM8B-201ENST00000555532 525 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AC144522.1-201ENST00000625111 1658 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 AC020916.1-201ENST00000587762 1774 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 RPL13AP19-201ENST00000434320 584 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 MIR3188-201ENST00000583494 85 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 MIR6842-201ENST00000612539 65 ntBASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms