Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 NORAD-201ENST00000565493 5339 ntBASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCUBE3Q8IX30 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 RN7SL692P-201ENST00000464677 288 ntBASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 RN7SL371P-201ENST00000578099 267 ntBASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AC093813.1-201ENST00000605066 256 ntBASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCUBE3Q8IX30 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SCUBE3Q8IX30 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.21■□□□□ 0.18
SCUBE3Q8IX30 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SCUBE3Q8IX30 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 AL033527.5-201ENST00000641382 801 ntBASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCUBE3Q8IX30 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 KRT8P22-201ENST00000562317 1415 ntBASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 AC007787.1-201ENST00000588095 1583 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms