Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 AC022616.1-201ENST00000518688 554 ntBASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 RN7SL560P-201ENST00000577943 264 ntBASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 AC112693.3-201ENST00000624819 1983 ntBASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 C18orf15-201ENST00000623680 2534 ntBASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 CD8B2-202ENST00000417670 633 ntBASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 MIR4741-201ENST00000579822 90 ntBASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AL354989.2-201ENST00000435838 1540 ntBASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AC055811.4-201ENST00000624039 1754 ntBASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE3BQ7Z3V4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 SSR4P1-203ENST00000599569 2260 ntBASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 AL360270.3-201ENST00000609118 1348 ntBASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE3BQ7Z3V4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 AC004466.1-201ENST00000599515 1080 ntBASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBE3BQ7Z3V4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms