Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 AL589987.1-201ENST00000453380 819 ntBASIC18.43■□□□□ 0.54
RNF20Q5VTR2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 RARRES2P5-201ENST00000564013 466 ntBASIC18.43■□□□□ 0.54
RNF20Q5VTR2 AC104794.3-201ENST00000566840 1248 ntBASIC18.43■□□□□ 0.54
RNF20Q5VTR2 AC036164.1-201ENST00000570544 333 ntBASIC18.43■□□□□ 0.54
RNF20Q5VTR2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 LINC02228-204ENST00000642115 2962 ntBASIC18.42■□□□□ 0.54
RNF20Q5VTR2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 CYMP-203ENST00000474680 1263 ntBASIC18.42■□□□□ 0.54
RNF20Q5VTR2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNF20Q5VTR2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 MEP1AP4-201ENST00000423244 1087 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 DOC2GP-202ENST00000514950 1163 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 OR2I1P-209ENST00000641730 5365 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms