Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 AC092183.1-201ENST00000469884 875 ntBASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 AC067863.1-201ENST00000494933 530 ntBASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 MIR6080-201ENST00000617359 66 ntBASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATPAF1Q5TC12 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATPAF1Q5TC12 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TUBB3P1-201ENST00000405796 1332 ntBASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATPAF1Q5TC12 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms