Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.71
LINC00242Q5T6M2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AC007967.2-201ENST00000432613 625 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 RN7SL589P-201ENST00000481268 310 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AC034105.1-201ENST00000563488 319 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 RN7SL510P-201ENST00000581311 263 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AC104692.2-201ENST00000603054 253 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AL513190.1-201ENST00000621254 727 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AL928921.2-201ENST00000641325 2442 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 BEND3P1-201ENST00000421591 1944 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AC104109.2-201ENST00000602919 1418 ntBASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00242Q5T6M2 AC018442.1-201ENST00000421439 2061 ntBASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms