Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 CICP11-201ENST00000434745 2827 ntBASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 AC093004.1-201ENST00000508850 424 ntBASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 WASH4P-201ENST00000564273 1246 ntBASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 CHCHD2P3-201ENST00000603038 451 ntBASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 AC023024.2-201ENST00000623561 1993 ntBASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 AC091951.1-201ENST00000512854 2465 ntBASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 MST1L-201ENST00000442552 2185 ntBASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HERC4Q5GLZ8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 AC092933.1-201ENST00000393644 945 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 TTTY23B-201ENST00000442790 549 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 KRT223P-202ENST00000449164 1292 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 DOC2GP-202ENST00000514950 1163 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 AC004790.1-201ENST00000612686 536 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 MIR6787-201ENST00000616675 61 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 AL158212.4-201ENST00000624062 1286 ntBASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC4Q5GLZ8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms