Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 AC006480.2-201ENST00000609770 1337 ntBASIC18.79■□□□□ 0.6
CCDC93Q567U6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 AL161670.2-201ENST00000557650 1227 ntBASIC18.79■□□□□ 0.6
CCDC93Q567U6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 AL136309.1-201ENST00000403917 691 ntBASIC18.78■□□□□ 0.6
CCDC93Q567U6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 AL596276.2-201ENST00000447525 331 ntBASIC18.78■□□□□ 0.6
CCDC93Q567U6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 AC012618.1-201ENST00000461223 412 ntBASIC18.78■□□□□ 0.6
CCDC93Q567U6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 AC018635.2-201ENST00000608625 364 ntBASIC18.78■□□□□ 0.6
CCDC93Q567U6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC93Q567U6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC93Q567U6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AL662844.4-201ENST00000606367 2838 ntBASIC18.77■□□□□ 0.6
CCDC93Q567U6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AC069218.1-201ENST00000435269 762 ntBASIC18.77■□□□□ 0.6
CCDC93Q567U6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 AC024909.3-201ENST00000611513 2257 ntBASIC18.77■□□□□ 0.6
CCDC93Q567U6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC93Q567U6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC93Q567U6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CCDC93Q567U6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms