Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 AC092135.3-201ENST00000624151 1846 ntBASIC14.41□□□□□ -0.1
RFX4Q33E94 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RFX4Q33E94 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RFX4Q33E94 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.41□□□□□ -0.1
RFX4Q33E94 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RFX4Q33E94 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RFX4Q33E94 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.41□□□□□ -0.1
RFX4Q33E94 AL671277.1-201ENST00000429656 993 ntBASIC14.41□□□□□ -0.1
RFX4Q33E94 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.41□□□□□ -0.1
RFX4Q33E94 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.41□□□□□ -0.1
RFX4Q33E94 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
RFX4Q33E94 AC092865.6-201ENST00000642101 219 ntBASIC14.41□□□□□ -0.1
RFX4Q33E94 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.41□□□□□ -0.1
RFX4Q33E94 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.41□□□□□ -0.1
RFX4Q33E94 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.41□□□□□ -0.1
RFX4Q33E94 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 IL9RP2-201ENST00000423948 1312 ntBASIC14.41□□□□□ -0.1
RFX4Q33E94 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RFX4Q33E94 AL137784.3-201ENST00000623858 2288 ntBASIC14.4□□□□□ -0.1
RFX4Q33E94 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.4□□□□□ -0.1
RFX4Q33E94 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 ZNF259P1-201ENST00000407656 1365 ntBASIC14.4□□□□□ -0.1
RFX4Q33E94 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 TFAMP1-201ENST00000412727 736 ntBASIC14.4□□□□□ -0.1
RFX4Q33E94 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.4□□□□□ -0.1
RFX4Q33E94 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 RNA5SP416-201ENST00000516838 111 ntBASIC14.4□□□□□ -0.1
RFX4Q33E94 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RFX4Q33E94 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFX4Q33E94 KRT8P37-201ENST00000451609 1420 ntBASIC14.4□□□□□ -0.1
RFX4Q33E94 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.4□□□□□ -0.1
RFX4Q33E94 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
RFX4Q33E94 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.39□□□□□ -0.11
RFX4Q33E94 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFX4Q33E94 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFX4Q33E94 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RFX4Q33E94 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.39□□□□□ -0.11
RFX4Q33E94 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RFX4Q33E94 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.39□□□□□ -0.11
RFX4Q33E94 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFX4Q33E94 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RFX4Q33E94 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFX4Q33E94 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFX4Q33E94 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFX4Q33E94 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFX4Q33E94 AC142381.1-201ENST00000426099 345 ntBASIC14.39□□□□□ -0.11
RFX4Q33E94 GHSR-202ENST00000427970 912 ntBASIC14.39□□□□□ -0.11
RFX4Q33E94 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.39□□□□□ -0.11
RFX4Q33E94 EEF1DP4-201ENST00000446006 880 ntBASIC14.39□□□□□ -0.11
RFX4Q33E94 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.39□□□□□ -0.11
RFX4Q33E94 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.39□□□□□ -0.11
RFX4Q33E94 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms